Jmodeltest

Author: S | 2025-04-24

jModelTest-2.1. . jModelTest-2.1. . jModelTest-2.1.4-release. To download the code, please copy the following command and execute it in the terminal jmodelTest. Contribute to JiandeWuu/jmodelTest development by creating an account on GitHub.

jModelTest - autofair.research.um.edu.mt

JMODELTEST 2.1.10:: DESCRIPTIONjModelTest is a tool to carry out statistical selection of best-fit models of nucleotide substitution. It implements five different model selection strategies: hierarchical and dynamical likelihood ratio tests (hLRT and dLRT), Akaike and Bayesian information criteria (AIC and BIC), and a decision theory method (DT). It also provides estimates of model selection uncertainty, parameter importances and model-averaged parameter estimates, including model-averaged phylogenies. Please note that the DT weights are very gross.jModelTest2 includes High Performance Computing (HPC) capabilities and additional features like new strategies for tree optimization, model-averaged phylogenetic trees (both topology and branch length), heuristic filtering and automatic logging of user activity.::DEVELOPERPosada Lab:: SCREENSHOTS:: REQUIREMENTSWindows / Linux / MacOSJava:: DOWNLOAD jMODELTEST:: MORE INFORMATIONCitationPosada D. 2008.jModelTest: Phylogenetic Model Averaging. Molecular Biology and Evolution 25: 1253-1256.Darriba D, Taboada GL, Doallo R, Posada D. 2012.jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9(8), 772. ModelTest-NG 0.1.6:: DESCRIPTIONModelTest-NG (ModelTest next generation) is a tool for selecting the best-fit model of evolution for DNA and protein alignments. ModelTest-NG supersedes jModelTest and ProtTest in one single tool, with graphical and command console interfaces.::DEVELOPERthe Exelixis Lab:: SCREENSHOTSN/A:: REQUIREMENTSLinux / MacOs:: DOWNLOAD ModelTest-NG:: MORE INFORMATIONCitationMol Biol Evol. 2019 Aug 20. pii: msz189. doi: 10.1093/molbev/msz189.ModelTest-NG: a new and scalable tool for the selection of DNA and protein evolutionary models.Darriba D, Posada D, Kozlov AM, Stamatakis A, Morel B, Flouri T. jModelTest-2.1. . jModelTest-2.1. . jModelTest-2.1.4-release. To download the code, please copy the following command and execute it in the terminal jmodelTest. Contribute to JiandeWuu/jmodelTest development by creating an account on GitHub. jModelTest-2.1. . jModelTest-2.1.4-release. jModelTest-2.0.1-release. 2.0.0-release. Clone or Download Clone/Download Prompt To download the code, please copy the Contains fasta alignments for jModelTest and jModelTest output. simstudy16taxa1k.tgz. As simstudy16taxa.tgz but with 16 taxa and sequences of 1K length. As simstudy5taxa.tgz but with substitution models sampled from all reversible models. Contains fasta alignments for jModelTest and jModelTest output.